BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E02LP1|AL426371
(171 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig168 227 6e-60
>3x_Contig168
Length = 941
Score = 227 bits (114), Expect = 6e-60
Identities = 124/126 (98%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 1 gatcaagaattaatattatttaaatagttgtaattttacacctttattacttaattcatt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 67 gatcaagaattaatattatttaaat-gttgtaattttacacctttattacttaattcatt 125
Query: 61 taaataatctcaaatataagttttatttaaagatctatttaatcatttattatttaataa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 126 taaataatctcaaatataagttttatttaaagatctatttaatcttttattatttaataa 185
Query: 121 taataa 126
||||||
Sbjct: 186 taataa 191
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3136
Number of Sequences: 1807
Number of extensions: 3136
Number of successful extensions: 565
Number of sequences better than 1.0e-20: 1
length of query: 171
length of database: 10,358,551
effective HSP length: 15
effective length of query: 156
effective length of database: 10,331,446
effective search space: 1611705576
effective search space used: 1611705576
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.0 bits)